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University of Virginia

Bacterial Bioinformatics

This course provides demonstrations and exercises for performing common genomics-based analysis tasks of bacterial sequence data. It uses BV-BRC, the Bacterial and Viral Bioinformatics Resource Center (merger of PATRIC, IRD and ViPR, the three former resources), as the platform for analysis. BV-BRC is the NIH/NIAID-funded bacterial Bioinformatics Resource Center, providing comprehensive bacterial genomic data with integrated analysis tools and visualizations. BV-BRC also provides a private workspace where users can upload and analyze their own data. Course participants will gain skills needed to do comparative analysis of bacterial genomes, starting with raw sequence data.The lessons in the first module cover genome assembly, annotation, phylogenetic tree construction, and protein family / proteome comparisons. Each lesson builds on the previous, creating a complete baseline analysis workflow. NOTE: The exercises in this course were developed using the PATRIC, the predecessor system to BV-BRC. However, BV-BRC was built from PATRIC, so most of the content is still the same.

状态:Scientific Visualization
状态:Data Integration
中级课程小时

精选评论

AS

5.0评论日期:Feb 6, 2024

It is really good...got to learn more about health informatics

AA

5.0评论日期:Apr 4, 2025

I have learnt so much from this course, although I am yet to complete it. Thumps up to Rebecca Wattam and PATRIC.org

PG

4.0评论日期:Aug 14, 2025

the course is great but i didnt receive any certificate

WL

5.0评论日期:Dec 4, 2022

It is a very good course to start to analyze biodata

YS

5.0评论日期:Oct 27, 2022

V​ery informative course content and I have learned a lot

PP

5.0评论日期:Dec 23, 2020

very useful course , can solve a lot of problem in bacterium genome analysis easily

NG

5.0评论日期:Feb 14, 2022

it was very informative course and i enjoyed doing home works and assessments.thank youRegardsNeeraja

MB

4.0评论日期:Jan 19, 2024

I expected a bit more of normal tools, but im happy that i got to know patric

JG

5.0评论日期:Jun 20, 2025

this course is very helpful for my project and give extra information about each genome .

EK

5.0评论日期:Oct 18, 2025

Thank you, Dr Rebecca, your effort are appreciated, great benefit by practicing through PATRIC

TM

5.0评论日期:May 14, 2025

As a PhD student, I greatly appreciated this course. Professor Rebecca's thorough explanations on a wide range of topics were incredibly valuable—thank you for your dedication!

GG

4.0评论日期:Feb 4, 2022

i appreciate the dedication and design of the course. it so practical and friendly. thank You Dr. Rebecca.

所有审阅

显示:20/72

5.0
评论日期:Dec 24, 2020
Megan Mauriello
3.0
评论日期:Jan 11, 2022
2040_ANSHU SHAHI
3.0
评论日期:Feb 25, 2021
Abdul Kader
5.0
评论日期:Jan 28, 2021
Sivaraman GK
5.0
评论日期:Apr 22, 2021
Wael Hadi
5.0
评论日期:Dec 20, 2021
MONALISA MERCES
5.0
评论日期:Sep 6, 2021
ogbolu Emmanuel
5.0
评论日期:Jan 15, 2022
Leen Abdulaal
5.0
评论日期:Mar 18, 2021
Deniz Yılmaz
1.0
评论日期:Jan 22, 2022
FAJAR AYYAZ
5.0
评论日期:Aug 14, 2025
Rodrigo Otavio Silva
5.0
评论日期:Apr 13, 2024
Aseel Araji
5.0
评论日期:Aug 14, 2021
Amro Hashish
5.0
评论日期:Feb 20, 2022
Aline Parolin Calarga
5.0
评论日期:Jun 26, 2021
Nicholas H
5.0
评论日期:Apr 28, 2021
Dewan S Khan
3.0
评论日期:Nov 8, 2022
Muhammad Qudduse Ahmad Rao
5.0
评论日期:Mar 30, 2025
Osman Merdan
5.0
评论日期:Mar 7, 2023
Tilaye Shibbiru MENGISTU
5.0
评论日期:May 14, 2025