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学生对 Technical University of Denmark (DTU) 提供的 Whole genome sequencing of bacterial genomes - tools and applications 的评价和反馈

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课程概述

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

热门审阅

SP

Sep 30, 2018

This course helped me a lot in determining bacterial typing. Just one question, in some quizzes I got some answers wrong so is there any way of knowing the right answer.

AR

May 18, 2023

Excellent course for students who don't know much about sequencing and its analysis. It's very easy and very understandable for students new to bioinformatics.

筛选依据：

176 - Whole genome sequencing of bacterial genomes - tools and applications 的 200 个评论（共 419 个）

创建者 hargun k

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Jul 30, 2020

It was an excellent course. really enjoyed learning and improving my skill set.

创建者 Pitithat P

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Aug 28, 2017

Very nice comprehensive course. Looking forward to join the metagenomic course

创建者 Gebreab T

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Jul 4, 2022

the most clear and to the point course i have ever taken.

Thank you very much!

创建者 Raj S

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Jan 20, 2021

It is a useful course for those with a basic knowledge of sequence analysis.

创建者 Dr. J T

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Aug 24, 2020

It has been a different experience. All the classes were really informative.

创建者 Kumar V

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Mar 17, 2019

Course contains relevant application based material. It was quite helpful.

创建者 Heba M M

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Oct 13, 2017

Good course, with amazing hands-on practice. Thanks it was really helpful.

创建者 TCH

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Jun 11, 2022

An excellent introduction to essential techniques and free, online tools.

创建者 Dr. D N

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Mar 23, 2020

This course is beneficial for microbial study with bioinformatics tools.

创建者 Adithya A

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May 23, 2018

EXCELLENT COURSE GOOD FOR ANY ONE WHO HAS A BASIC KNOWLEDGE ON GENETICS

创建者 Olalekan O

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May 6, 2020

It's quite an instructive, impactful and beneficial to my new course.

创建者 Siriwan M

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Nov 5, 2023

Tools are very easy and useful. Thank the teachers of DTU so much.

创建者 Patryk W

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Jul 14, 2023

The best course. I learned a lot of new very important information.

创建者 Munirah F A

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Sep 1, 2020

Good information and easy to get all the information, Thank you all

创建者 Atif A C

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Sep 2, 2021

It was a great course for beginers like me. Thanks a lot for this.

创建者 Darío G

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Feb 4, 2021

Very useful course, most of the classes are easily understandable.

创建者 Jutimala P

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Jun 30, 2020

indeed a very well explained course on bacterial genome sequencing

创建者 Filippo S

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Aug 2, 2021

practical, interesting, the final project/challenge was fantastic

创建者 Neha G

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Jul 10, 2020

Detailed course, learned to utilize various bioinformatics tools.

创建者 Tiyasa` H

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Mar 18, 2024

Awesome course design. Thank you so much for such a great course

创建者 Kotla S

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Apr 27, 2022

Very designed and useful video and nice explanation by DTU staff

创建者 Arthur d M P

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Jun 30, 2020

in fact it was a really hard, but i am happy that i have done it

创建者 Sachin S

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May 19, 2020

It is really a great experience, I have learnt a lot. Thank you

创建者 Devina B

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Jan 14, 2020

Great it was amazingly delivered and straightforward.

Thank you

创建者 Rama V

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Jan 13, 2021

Extremely good course on Whole Genome Sequence Analysis Tools